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AmpliSeq for Illumina Antimicrobial Resistance Research Panel

This sequencing research panel targets 478 antimicrobial resistance genes to help understand antibiotic treatment efficacy for 28 antibiotic classes.

Overview

The AmpliSeq for Illumina Antimicrobial Resistance Research Panel provides a quick, accurate, and cost-effective tool to detect 28 different antibiotic classes. The panel contains 2 pools comprised of a total of 815 amplicons to assess the presence of 478 antimicrobial resistance (AMR) genes. This panel was developed in collaboration with a team from Lawrence Livermore National Laboratory, University of Chicago, Argonne National Laboratory, Los Alamos National Laboratory and Naval Research Laboratory.

Community Panel features

AmpliSeq for Illumina Community Panels are made-to-order. We provide the designs for your convenience; however, they do not have associated performance metrics. For predesigned and tested content, view AmpliSeq for Illumina Ready-to-Use Panels.

AmpliSeq for Illumina Community Panels contain content selected and designed with input from leading disease researchers. You can order this community panel as is, or customize the panel to meet your needs, using DesignStudio software to add or remove genes and amplicons.

Learn more about DesignStudio

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Specifications

Method Amplicon Sequencing
Nucleic acid type DNA
Number of amplicons 815 total. 2 pools. (Pool 1: 408 amplicons. Pool 2: 407 amplicons.)
Species category Bacteria
Technology Sequencing

Required products

In addition to the community panel, you will also need an AmpliSeq Library PLUS kit, index adapters, and AmpliSeq for Illumina Library Equalizer, an easy-to-use solution for normalizing libraries while using AmpliSeq for Illumina library prep methods.

Order Library PLUS, Adapters, and Accessory Products

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Applications

Related applications and methods

Microbial genomics

Next-generation sequencing (NGS) is changing microbial genomics. Use NGS to discover novel microbes, monitor outbreaks, analyze food sources, and more.

Molecular epidemiology

Use NGS to gain a better understanding of mechanisms that lead to infection and spread as well as phylogenetic analysis to determine relatedness among organisms.

Microbial sequencing methods

NGS-based microbial sequencing methods include shotgun metagenomics, 16S rRNA sequencing, whole-genome and de novo sequencing, and transcriptomics.

Documentation

Product literature
Support documentation

Panel (1)

AmpliSeq for Illumina Antimicrobial Resistance Research Panel

20020495

Custom assay supporting 750 or 3000 samples with < 4999 amplicons. Purchase Library PLUS and index adapters separately.

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